Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826615.1_cds_XP_016502725.1_16335
CDS Infomation

[gene=LOC107820885] [db_xref=GeneID:107820885] [protein=AP-5 complex subunit mu] [protein_id=XP_016502725.1] [location=complement(join(1623..1694,3465..4360,4472..4755,7265..7576,11339..11482,11564..11631))] [gbkey=CDS]
Sequence

ATGCCGGGCTCTTGTAGTATTAGAGCTCTCTGGATCCTCGCCAATCAAGACACTGTTGTT
TTCTCCCGGAGATTTCCGGTTGTAGAGAAGAGGTGGCGGGCGGCGTGTGAGAGAGATAAG
AGTTTAATCGAGGATGATTTGAAGTATACTGTGGTGCCTTCTCTTCCTACAGATTCAGAG
ATAGCTGCTGCATTCATTGACCGCAAGAAAAGGGAGGGATCTGCTCGTGGATTTGGCATT
AGGATAAACCATTCAGTTGAAGGTTCAGATTCCTGGGTTGATGATCCAATTACGCGTCAC
ATAATAAGTCTTTACACTAAAAATGAACAGGAGGAAACAAATCGTACTTTGTGGCCGCTT
GTTTTGCACATAAAGGACCACTATTGTATCCTTGTACTGCCTTTAGTGGAACCTCATCAT
CTAAAAACATATATAAGGATGTGTAAAAGATCTGACTGTGGAAATGCTGTTGGAGCAGAT
GAAAGTTTATCAGCCCTCCTGCTTAATCTTCCATCCATCACAGGGGCATTTATGGTGGGT
CACATGATAGGAGACATCATAACAGGCAATGTGACAGAACCTGAAATAGTCATAAGTGCA
TCTCCATCAGTGGGTGGGTTGTTGGATTCTCTCACTGGAAGTATTGGTATCTCAGCAAGA
GCAAAACCTGTAGCTGCTCCAGTTGCAGGATCCACAGCTTCTGGAGCTGCAACCAGTGGA
GCAATGACATCTGATGCTCCAAAGATTGGTTTGAGGCCCCTAGATAGAGATGCTATTCGC
TCTTTTATAAGCAGTGCGATGCCTTTTGGCACCCCTCTGGATCTTAACTACACCAACATT
TCAGCTGTCAAGATAAATGGATTTTCTTCAGCAGATATCCCTCCTGCAGACCAGAAGCAA
CCAGCATGGAAGCCTTATCTCTATAGAGGGAAGCAGAGAATTCTGTTCACAATTCACGAG
ACAGTCCATGCTGCCATGTATGATCGCGATGAAATTCCAGATAGCATAACAATTTCAGGT
CAAGTTAACTGTCGAGCGGAATTAGAAGGGTTGCCCGATGTGATGTTCCCACTTATAGGT
TTGGACACTGCTCGTGTTGAGCTATTATCCTTCCACCCCTGTGCTCAAGTTCCAGAGCAT
GGTAACGAGAAGCAAACACTTATGTTCTCACCACCATTAGGAAATTTCGTATTGATGCGT
TATCAGGCACTTTGTGGTATGCGGCCTCCGATCAAGGGTTTTTATCAGCTTTCAATGGTT
TCAGAAAATGAAGGTGCTTTTTTGTTTAGGTTACGGCTCATGGAAGGTTATAGAGCTCCT
CTGTCGATGGATTTCTGCACAGTGACAATACCTTTCCCTAGGAGAAGGGTGCTTTCTTTT
GAAGGGACACCTTCTATTGGAACAGTTTCAGTTGCTGAACACTTTGTTGAATGGAAAATT
ATAACAACCGGTCGAGGAGTATCAGGAAAGAGTGTTGAGGCAACATTTCCAGGGACAGTA
AAGTTTGCTCCATGGCAACCTCAAAGATTGCCTTCCTCAGGGGCAGTACTTGGGAATATG
GAAGATGAAGAGAGTGATGCCGAAACAGAGTCGACGAATAATATGGCGAACGTGGAAGAC
TTTTTAATGGAGAAAATGAATAAGGATCTTCAAGCAGTTGATTTGGAGGAGCCATTTTGC
TGGCAAGCATACGATTATGCTAAAGTTTCGTTCAAGATAATGGGAGGATCATTGTCAGGA
ATGTCTATTGATCCAAAATCTGTAAGTCCTCTATAA

Peptide Sequence

PEP ID

XP_016502725.1
PEP Infomation

PREDICTED: AP-5 complex subunit mu [Nicotiana tabacum]
Sequence

MPGSCSIRALWILANQDTVVFSRRFPVVEKRWRAACERDKSLIEDDLKYTVVPSLPTDSE
IAAAFIDRKKREGSARGFGIRINHSVEGSDSWVDDPITRHIISLYTKNEQEETNRTLWPL
VLHIKDHYCILVLPLVEPHHLKTYIRMCKRSDCGNAVGADESLSALLLNLPSITGAFMVG
HMIGDIITGNVTEPEIVISASPSVGGLLDSLTGSIGISARAKPVAAPVAGSTASGAATSG
AMTSDAPKIGLRPLDRDAIRSFISSAMPFGTPLDLNYTNISAVKINGFSSADIPPADQKQ
PAWKPYLYRGKQRILFTIHETVHAAMYDRDEIPDSITISGQVNCRAELEGLPDVMFPLIG
LDTARVELLSFHPCAQVPEHGNEKQTLMFSPPLGNFVLMRYQALCGMRPPIKGFYQLSMV
SENEGAFLFRLRLMEGYRAPLSMDFCTVTIPFPRRRVLSFEGTPSIGTVSVAEHFVEWKI
ITTGRGVSGKSVEATFPGTVKFAPWQPQRLPSSGAVLGNMEDEESDAETESTNNMANVED
FLMEKMNKDLQAVDLEEPFCWQAYDYAKVSFKIMGGSLSGMSIDPKSVSPL

Transcript Sequence

Gene sequence data has not been registered.